SOM cluster: 1858

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 650
Promoter: 53%
CpG-Island: 1%
Conserved: 31%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 66/100 | e-val: 3.3e-23
Factore-val(match)DB
Foxq10.00086219JASPAR
Lhx30.00090202JASPAR
Foxd30.0032434JASPAR
ARID3A0.006407JASPAR
Evi10.021175JASPAR

BED file downloads

Download top of 650 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150541540-150541690MCL113.05
chr1: 145477745-145477895GNRHR228.17
chr3: 185081040-185081190snoU1341.09
chr1: 197171120-197171270CRB149.45
chr12: 27398300-27398450STK38L49.71
chr13: 48986440-48986590LPAR649.74
chr9: 133700180-133700330ABL149.89
chr15: 96870300-96870450RP11-522B15.453.17
chr15: 96870300-96870450NR2F253.17
chr9: 27333505-27333655RP11-298E2.256.28
View top connections.

Other

CodePlot