SOM cluster: 188

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 107
Promoter: 8%
CpG-Island: 6%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 0
Factore-val(match)DB
AP10.0000000005052JASPAR
NFE2L20.00000000087202JASPAR
NFE2L1::MafG0.0017622JASPAR
Pax20.002169JASPAR
PPARG0.0026931JASPAR
Sites: 37/100 | e-val: 2.7e-18
Factore-val(match)DB
SP10.0000000035337JASPAR
Pax40.000000017453JASPAR
EWSR1-FLI10.000058231JASPAR
SPIB0.000075984JASPAR
MZF1_5-130.00056149JASPAR
Sites: 52/100 | e-val: 0.0000048
Factore-val(match)DB
FEV0.00000000011512JASPAR
Stat30.000000030516JASPAR
ELF50.0000047379JASPAR
SPI10.0000076479JASPAR
SPIB0.000015598JASPAR

BED file downloads

Download top of 107 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr22: 46943900-46944050GRAMD449.55
chr22: 46943900-46944050RP5-996D20.349.55
chr3: 42694320-42694470CCDC1350.73
chr2: 70161580-70161730snoU1350.95
chr2: 70161580-70161730GMCL150.95
chr2: 70161580-70161730PCBP1-AS150.95
chr2: 160353840-160353990AC008277.152.15
chr20: 32400140-32400290PXMP455.41
chr20: 32400140-32400290RP4-553F4.655.41
chr3: 152939660-152939810RAP2B61.42
View top connections.

Other

CodePlot