SOM cluster: 1894

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 830
Promoter: 2%
CpG-Island: 0%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 22/100 | e-val: 0.69
Factore-val(match)DB
NR3C10.00047501JASPAR
Foxd30.00073537JASPAR
Evi10.0019898JASPAR
SPI10.0027376JASPAR
NKX3-10.011739JASPAR

BED file downloads

Download top of 830 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 230967580-230967730TTC1336.71
chr17: 76265040-76265190RP11-219G17.442.09
chr8: 94807160-94807310TMEM6745.13
chr8: 72838840-72838990RP11-383H13.148.13
chr8: 72838840-72838990MSC48.13
chr11: 32448500-32448650WT1-AS49.99
chr17: 67056100-67056250ABCA954.03
chr17: 67056100-67056250ABCA654.03
chr8: 25934200-25934350RNA5SP25856.38
chr4: 95329140-95329290PDLIM558.5
View top connections.

Other

CodePlot