SOM cluster: 190
Cluster Hypersensitivity Profile
Genomic Location Trend
These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.Stats
Number of sites: 96Promoter: 28%
CpG-Island: 18%
Conserved: 50%
Enriched Motifs & Matches
Match Detail: [Jaspar]Sites: 47/96 | e-val: 0.00000087 | ||
---|---|---|
Factor | e-val(match) | DB |
SP1 | 0.000030297 | JASPAR |
Tal1::Gata1 | 0.00031892 | JASPAR |
Pax4 | 0.00065098 | JASPAR |
EWSR1-FLI1 | 0.0028475 | JASPAR |
RREB1 | 0.0048141 | JASPAR |
BED file downloads
Top 10 Example Regions
Location | Gene Link | Dist. |
---|---|---|
chr17: 76919760-76919910 | TIMP2 | 44.35 |
chr19: 51297680-51297830 | C19orf48 | 46.83 |
chr19: 51297680-51297830 | KLK1 | 46.83 |
chr19: 51297680-51297830 | KLK2 | 46.83 |
chr19: 51297680-51297830 | CLEC11A | 46.83 |
chr20: 279220-279370 | NRSN2 | 57.88 |
chr20: 279220-279370 | ZCCHC3 | 57.88 |
chr20: 279220-279370 | AL034548.1 | 57.88 |
chr20: 32320340-32320490 | E2F1 | 73.26 |
chr20: 32320340-32320490 | CHMP4B | 73.26 |