SOM cluster: 1927

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 230
Promoter: 2%
CpG-Island: 0%
Conserved: 35%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 8.5e-17
Factore-val(match)DB
AP10.0000000086581JASPAR
NFE2L20.0000018603JASPAR
Pax60.0098548JASPAR
NFE2L1::MafG0.028971JASPAR
GATA20.034053JASPAR

BED file downloads

Download top of 230 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 53032500-53032650RP11-26M5.249.12
chr3: 155134680-155134830RP11-639F1.151.42
chr18: 56675580-56675730ZNF53254.27
chr2: 65233760-65233910RNU6-548P55.77
chr2: 65233760-65233910RAB1A55.77
chr2: 65233760-65233910snoU1355.77
chr2: 65233760-65233910RN7SL211P55.77
chr10: 24780020-24780170KIAA121758.8
chr17: 60796020-60796170MARCH1059.94
chr1: 180554740-180554890XPR160.17
View top connections.

Other

CodePlot