SOM cluster: 1942

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 9084
Promoter: 0%
CpG-Island: 0%
Conserved: 25%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 20/100 | e-val: 0.000000087
Factore-val(match)DB
Foxq10.000071575JASPAR
Pax40.00010189JASPAR
Foxd30.0001682JASPAR
Nkx2-50.0008388JASPAR
ARID3A0.0010678JASPAR

BED file downloads

Download top of 9084 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150781000-150781150RP11-235D19.213.71
chr1: 147829585-147829735RP11-495P10.118.42
chr8: 62940060-62940210CTD-2571E19.130.11
chr14: 52686480-52686630PTGDR33.41
chr10: 25466760-25466910GPR15836.9
chr1: 160881860-160882010CD24440.88
chr2: 109785280-109785430SNRPGP945.86
chr1: 203348285-203348435FMOD47.99
chr11: 111370340-111370490RP11-794P6.148.16
chr8: 52614765-52614915RP11-11C20.148.83
View top connections.

Other

CodePlot