SOM cluster: 1952

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1719
Promoter: 0%
CpG-Island: 0%
Conserved: 77%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 76/100 | e-val: 0
Factore-val(match)DB
CTCF0.0000000000000014433JASPAR
INSM10.0014983JASPAR
TAL1::TCF30.0045608JASPAR
MYC::MAX0.0097828JASPAR
Zfp4230.016888JASPAR
Sites: 88/100 | e-val: 0
Factore-val(match)DB
Foxd30.00041973JASPAR
MEF2A0.0025841JASPAR
Lhx30.0026381JASPAR
HNF1B0.0063012JASPAR
HNF1A0.0082225JASPAR
Sites: 38/100 | e-val: 0.000029
Factore-val(match)DB
FOXA10.000030162JASPAR
Foxa20.00016624JASPAR
IRF10.00028224JASPAR
ARID3A0.0011833JASPAR
HNF1A0.0018072JASPAR

BED file downloads

Download top of 1719 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 110243420-110243570KLF425.69
chr3: 190962140-190962290CCDC5034.69
chr1: 152469880-152470030LCE3E39.1
chr1: 152469880-152470030RP1-91G5.339.1
chr1: 68936180-68936330TCEB1P1839.39
chr1: 68936180-68936330RPE6539.39
chr2: 150417880-150418030RNU6-601P41.85
chr7: 140426240-140426390NDUFB242.16
chr12: 44230500-44230650TMEM11744.49
chr9: 132196600-132196750LINC0096345.66
View top connections.

Other

CodePlot