SOM cluster: 1958

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 388
Promoter: 2%
CpG-Island: 0%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.00013
Factore-val(match)DB
Foxq10.0012253JASPAR
Lhx30.003989JASPAR
HNF1B0.0058588JASPAR
NFATC20.0092454JASPAR
HNF1A0.010357JASPAR

BED file downloads

Download top of 388 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 16808860-16809010SOX646.01
chr8: 55318080-55318230SOX1748.56
chr1: 162375700-162375850C1orf22651.06
chr9: 125026380-125026530LHX654.34
chr20: 33723640-33723790PROCR62.13
chr20: 33723640-33723790EDEM262.13
chr11: 62390060-62390210LRRN4CL65.11
chr11: 62390060-62390210EEF1G65.11
chr3: 171430440-171430590PLD171.68
chr3: 171430440-171430590PP1343971.68
View top connections.

Other

CodePlot