SOM cluster: 1966

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 149
Promoter: 27%
CpG-Island: 68%
Conserved: 70%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.00022509JASPAR
Klf40.0042246JASPAR
Egr10.0066731JASPAR
Zfx0.02065JASPAR
TFAP2A0.044373JASPAR
Sites: 94/100 | e-val: 1.2e-27
Factore-val(match)DB
TFAP2A0.00080529JASPAR
SP10.0015739JASPAR
E2F10.0078764JASPAR
PLAG10.023244JASPAR
Myb0.043124JASPAR

BED file downloads

Download top of 149 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 130616540-130616690ENG43.21
chr9: 130616540-130616690RP11-228B15.443.21
chr16: 4390080-4390230DNAJA349.44
chr1: 66999500-66999650SGIP154.84
chr17: 1965940-1966090HIC156.15
chr8: 10587300-10587450CTD-2135J3.358.21
chr15: 91500340-91500490RCCD162.16
chr20: 33146740-33146890ITCH65.96
chr20: 33146740-33146890MAP1LC3A65.96
chr7: 131242925-131243075PODXL68.77
View top connections.

Other

CodePlot