SOM cluster: 197

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 446
Promoter: 74%
CpG-Island: 88%
Conserved: 83%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 100/100 | e-val: 0
Factore-val(match)DB
SP10.000091148JASPAR
Egr10.00072256JASPAR
NHLH10.0066965JASPAR
TFAP2A0.016344JASPAR
Klf40.017177JASPAR
Sites: 99/100 | e-val: 0
Factore-val(match)DB
SP10.000000015178JASPAR
Klf40.000070878JASPAR
TFAP2A0.00049169JASPAR
Egr10.0022846JASPAR
Zfx0.0046772JASPAR

BED file downloads

Download top of 446 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 48534760-48534910SUV39H139.79
chrX: 48534760-48534910AF196970.339.79
chr11: 57103320-57103470TNKS1BP146.21
chr11: 57103320-57103470RP11-872D17.846.21
chr11: 57103320-57103470SLC43A346.21
chr19: 14016880-14017030ZSWIM449.93
chr19: 14016880-14017030DCAF1549.93
chr19: 14016880-14017030PODNL149.93
chr7: 116502320-116502470MET50.97
chr9: 131464720-131464870PKN360.39
View top connections.

Other

CodePlot