SOM cluster: 1986

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 177
Promoter: 0%
CpG-Island: 0%
Conserved: 39%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.0000000014
Factore-val(match)DB
Foxd30.00010146JASPAR
HNF1A0.00045008JASPAR
Prrx20.0010951JASPAR
HNF1B0.0014194JASPAR
Sox20.0020699JASPAR
Sites: 25/100 | e-val: 0.5
Factore-val(match)DB
AP10.000000009975JASPAR
NFE2L20.0000003504JASPAR
HNF1B0.0023614JASPAR
PPARG0.0094309JASPAR
Pax20.014019JASPAR

BED file downloads

Download top of 177 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 107939780-107939930NRCAM47.21
chr17: 15845205-15845355ZSWIM751.61
chr17: 15845205-15845355ADORA2B51.61
chr10: 33422640-33422790RP11-462L8.160.52
chr4: 157685440-157685590PDGFC60.6
chr4: 135137700-135137850PABPC4L66.82
chrX: 17632420-17632570RP1-60N8.172.47
chrX: 17632420-17632570NHS72.47
chrX: 17632420-17632570NHS-AS172.47
chr1: 115612360-115612510RP4-666F24.376.96
View top connections.

Other

CodePlot