SOM cluster: 199

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 220
Promoter: 24%
CpG-Island: 8%
Conserved: 82%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 77/100 | e-val: 0
Factore-val(match)DB
CTCF0.00000000000031297JASPAR
INSM10.0014117JASPAR
TAL1::TCF30.0043249JASPAR
Zfp4230.0074162JASPAR
MYC::MAX0.019861JASPAR

BED file downloads

Download top of 220 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 129209180-129209330PLXND132.77
chr3: 129209180-129209330H1FOO32.77
chr1: 203595720-203595870ATP2B441.18
chr3: 160117280-160117430MIR16-248.79
chr17: 40669700-40669850COASY54.56
chr17: 40669700-40669850PSMC3IP54.56
chr1: 115681680-115681830RP4-666F24.357.66
chr1: 178001100-178001250RP11-568K15.160.54
chr3: 37254640-37254790LRRFIP262.11
chr12: 109197360-109197510SSH168.53
View top connections.

Other

CodePlot