SOM cluster: 1990

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 7043
Promoter: 6%
CpG-Island: 3%
Conserved: 13%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 4.1e-16
Factore-val(match)DB
TFAP2A0.00015302JASPAR
PLAG10.00019325JASPAR
Klf40.0010224JASPAR
EBF10.0076203JASPAR
Zfp4230.008489JASPAR
Sites: 29/100 | e-val: 0.15
Factore-val(match)DB
SP10.000000011667JASPAR
Pax40.000013811JASPAR
Klf40.000035161JASPAR
RREB10.00018348JASPAR
Tal1::Gata10.00092313JASPAR

BED file downloads

Download top of 7043 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149696605-149696755HIST2H2BF13.02
chr1: 149872365-149872515BOLA113.02
chr1: 151018905-151019055PRUNE13.02
chr1: 149872365-149872515HIST2H2BE13.02
chr1: 151018905-151019055C1orf5613.02
chr1: 151298825-151298975RP11-126K1.216.89
chr1: 150935100-150935250RP11-316M1.1226.8
chr8: 144770485-144770635PYCRL28.22
chr1: 150979965-150980115CDC42SE128.32
chr16: 11408145-11408295Y_RNA32.76
View top connections.

Other

CodePlot