SOM cluster: 2000

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 131
Promoter: 6%
CpG-Island: 0%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 33/100 | e-val: 0.00000000000043
Factore-val(match)DB
HNF1A0.0000000000000013323JASPAR
HNF1B0.000000000000034972JASPAR
NR1H2::RXRA0.0007593JASPAR
Lhx30.001091JASPAR
ARID3A0.0016921JASPAR
Sites: 48/100 | e-val: 0.00021
Factore-val(match)DB
AP10.0000000012006JASPAR
NFE2L20.00000010032JASPAR
Foxa20.00061955JASPAR
FOXA10.0012115JASPAR
Pax60.007579JASPAR

BED file downloads

Download top of 131 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 26678460-26678610CD5246.52
chr1: 26678460-26678610AIM1L46.52
chr17: 76373540-76373690SNORA3051.03
chr7: 116351260-116351410MET56.21
chr14: 22901580-22901730TRAJ5268.34
chr9: 116282120-116282270RGS368.58
chr9: 116282120-116282270RP11-168K11.368.58
chr4: 90044720-90044870TIGD277.66
chr7: 95060260-95060410PON279.26
chr7: 95060260-95060410AC004022.879.26
View top connections.

Other

CodePlot