SOM cluster: 2001

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 54604
Promoter: 1%
CpG-Island: 0%
Conserved: 11%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/100 | e-val: 0.0041
Factore-val(match)DB
Nkx2-50.00037664JASPAR
HNF1A0.0003976JASPAR
MEF2A0.0018217JASPAR
Lhx30.0033219JASPAR
SOX100.0054895JASPAR
Sites: 28/100 | e-val: 0.0023
Factore-val(match)DB
Pou5f10.00062085JASPAR
Sox20.0009858JASPAR
Foxd30.0013875JASPAR
MEF2A0.0018624JASPAR
NFATC20.0062327JASPAR

BED file downloads

Download top of 54604 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150423705-150423855RPRD212.94
chr1: 146495140-146495290NBPF13P13.25
chr12: 42194205-42194355RP11-630C16.128.16
chr1: 200071625-200071775RP11-47A17.228.25
chr17: 5063505-5063655ZNF59433.69
chr17: 17965085-17965235MYO15A33.92
chr15: 100844645-100844795ADAMTS1733.97
chr11: 130054965-130055115ZBTB4434.15
chr1: 92695565-92695715RPAP234.9
chr19: 55213045-55213195KIR2DL135.78
View top connections.

Other

CodePlot