SOM cluster: 2011

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 258
Promoter: 2%
CpG-Island: 0%
Conserved: 41%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 71/100 | e-val: 8.2e-30
Factore-val(match)DB
FEV0.000000000085103JASPAR
SPI10.00000037626JASPAR
ELK40.0000037409JASPAR
ELF50.0000045901JASPAR
Stat30.000074054JASPAR

BED file downloads

Download top of 258 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 90223085-90223235LRRC8C41.71
chr1: 90223085-90223235RP11-413E1.441.71
chr1: 209943085-209943235IRF644.35
chr19: 35488120-35488270GRAMD1A44.85
chr19: 35488120-35488270ZNF79244.85
chr3: 141272060-141272210KRT18P3549.86
chr3: 141272060-141272210RASA2-IT149.86
chr3: 141272060-141272210RASA249.86
chr13: 99647240-99647390DOCK956.3
chr13: 99647240-99647390RPL7L1P1256.3
View top connections.

Other

CodePlot