SOM cluster: 2022

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 470
Promoter: 22%
CpG-Island: 24%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 15/100 | e-val: 0.58
Factore-val(match)DB
Foxq10.000245JASPAR
Foxd30.00085754JASPAR
IRF10.0047072JASPAR
ARID3A0.0050052JASPAR
FOXF20.0061115JASPAR

BED file downloads

Download top of 470 regions.

Top 10 Example Regions

LocationGene LinkDist.
chrX: 135248500-135248650FHL140.74
chrX: 135248500-135248650MAP7D340.74
chrX: 135248500-135248650snoU1340.74
chr8: 55051840-55051990TDGF1P544.03
chr19: 10877400-10877550ILF347.04
chr19: 10877400-10877550C19orf3847.04
chr19: 20348600-20348750ZNF48647.06
chr9: 109625620-109625770RP11-508N12.449.85
chr9: 109625620-109625770ZNF46249.85
chr22: 44207700-44207850SULT4A150.14
View top connections.

Other

CodePlot