SOM cluster: 2030

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 136
Promoter: 8%
CpG-Island: 4%
Conserved: 85%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 85/100 | e-val: 0
Factore-val(match)DB
REST0JASPAR
RXR::RAR_DR50.0008342JASPAR
TLX1::NFIC0.0054849JASPAR
SOX90.031157JASPAR
Mafb0.035054JASPAR
Sites: 47/100 | e-val: 3e-24
Factore-val(match)DB
SP10.000000066498JASPAR
EWSR1-FLI10.0000002183JASPAR
Pax40.00094935JASPAR
RREB10.0016824JASPAR
Klf40.011419JASPAR
Sites: 21/100 | e-val: 0.013
Factore-val(match)DB
REST0.00000000030603JASPAR
Myf0.00094299JASPAR
REL0.0037441JASPAR
NHLH10.010854JASPAR
NF-kappaB0.028005JASPAR

BED file downloads

Download top of 136 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 144183305-144183455LY6E36.36
chr8: 144183305-144183455C8orf3136.36
chr5: 176231040-176231190HK349.14
chr11: 119389640-119389790USP2-AS157.21
chr17: 57243460-57243610SKA263.03
chr11: 122852545-122852695SNORD14C67.98
chr22: 23746960-23747110KB-1269D1.875.04
chr22: 23746960-23747110AP000344.375.04
chr9: 79075400-79075550GCNT176.62
chr2: 119924760-119924910STEAP377.23
View top connections.

Other

CodePlot