SOM cluster: 2033

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 97
Promoter: 1%
CpG-Island: 0%
Conserved: 28%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 11/97 | e-val: 0.001
Factore-val(match)DB
ARID3A0.0076478JASPAR
REST0.011494JASPAR
FEV0.018847JASPAR
NR2F10.018882JASPAR
Myf0.025676JASPAR
Sites: 37/97 | e-val: 0.48
Factore-val(match)DB
NKX3-10.0029336JASPAR
ARID3A0.0046233JASPAR
Foxd30.0053081JASPAR
MEF2A0.006286JASPAR
Lhx30.0084222JASPAR

BED file downloads

Download top of 97 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 117787765-117787915RP11-728F11.478.72
chr2: 178467700-178467850AGPS83.35
chr4: 15968025-15968175FGFBP2102.93
chr7: 129796125-129796275SSMEM1115.17
chr6: 65948925-65949075EYS147.5
View top connections.

Other

CodePlot