SOM cluster: 2037

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 23100
Promoter: 2%
CpG-Island: 2%
Conserved: 16%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 34/100 | e-val: 0.0000000000000047
Factore-val(match)DB
EWSR1-FLI10.0000080126JASPAR
SP10.00063039JASPAR
FEV0.0017242JASPAR
REST0.0019844JASPAR
ESR10.0021123JASPAR
Sites: 32/100 | e-val: 0.23
Factore-val(match)DB
PLAG10.0000048558JASPAR
PPARG::RXRA0.00028739JASPAR
SP10.00039113JASPAR
REST0.0020415JASPAR
TFAP2A0.0036035JASPAR
Sites: 25/100 | e-val: 1.4
Factore-val(match)DB
REST0.0016769JASPAR
PLAG10.0066126JASPAR
EBF10.0080672JASPAR
SPIB0.00826JASPAR
TAL1::TCF30.017064JASPAR
Sites: 19/100 | e-val: 0.014
Factore-val(match)DB
Myf0.000028809JASPAR
Myb0.0034464JASPAR
PLAG10.014425JASPAR
NHLH10.01949JASPAR
Sox20.021018JASPAR

BED file downloads

Download top of 23100 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149235485-149235635RP11-403I13.615.39
chr1: 149235005-149235155RP11-403I13.417.52
chr1: 145528565-145528715RP11-315I20.327.36
chr8: 95916025-95916175TP53INP130.44
chr8: 95916025-95916175CCNE230.44
chr5: 1150405-1150555CTD-3080P12.330.94
chr1: 151338105-151338255RP11-126K1.831.44
chr2: 90190745-90190895IGKV1D-832.9
chr1: 145537665-145537815RNF11534.13
chr1: 145537665-145537815POLR3C34.13
View top connections.

Other

CodePlot