SOM cluster: 2049

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3340
Promoter: 1%
CpG-Island: 0%
Conserved: 16%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 25/100 | e-val: 0.038
Factore-val(match)DB
AP10.00000010214JASPAR
NFE2L20.00000082551JASPAR
NFE2L1::MafG0.00035689JASPAR
Pdx10.00092799JASPAR
Lhx30.0011258JASPAR

BED file downloads

Download top of 3340 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 37304420-37304570GOLGA425.43
chr8: 101788100-101788250Y_RNA33.14
chr18: 61550920-61551070HMSD38.16
chr18: 61550920-61551070SERPINB838.16
chr3: 8840560-8840710OXTR41.13
chr8: 16129660-16129810RP11-447G11.142.71
chr8: 101960140-101960290YWHAZ44.5
chr1: 80850240-80850390RP11-339D23.146.89
chr12: 27494020-27494170ARNTL247.19
chr9: 104298780-104298930PPP3R247.66
View top connections.

Other

CodePlot