SOM cluster: 2059

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3017
Promoter: 44%
CpG-Island: 0%
Conserved: 19%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 41/100 | e-val: 0.00000000000045
Factore-val(match)DB
Foxd30.000018708JASPAR
Foxq10.00031243JASPAR
MEF2A0.0023065JASPAR
ARID3A0.0083468JASPAR
Lhx30.0096278JASPAR

BED file downloads

Download top of 3017 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150124420-150124570PLEKHO112.94
chr1: 146643000-146643150RP11-325P15.213.02
chr1: 145477900-145478050ANKRD3513.02
chr1: 145477900-145478050RP11-458D21.113.02
chr1: 147143060-147143210ACP613.13
chr1: 147143060-147143210RP11-533N14.313.13
chr1: 150520905-150521055TARS214.22
chr1: 146715580-146715730RP11-337C18.423.81
chr3: 186284425-186284575DNAJB1126.05
chr3: 186284425-186284575RP11-134F2.226.05
View top connections.

Other

CodePlot