SOM cluster: 2062

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1977
Promoter: 8%
CpG-Island: 5%
Conserved: 18%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 5.8e-25
Factore-val(match)DB
SP10.0000000068901JASPAR
Pax40.00000040435JASPAR
RREB10.000054744JASPAR
Tal1::Gata10.00030425JASPAR
MZF1_5-130.0010896JASPAR
Sites: 19/100 | e-val: 0.068
Factore-val(match)DB
PLAG10.0013504JASPAR
REST0.0047876JASPAR
EBF10.0219JASPAR
INSM10.023874JASPAR
CTCF0.041183JASPAR

BED file downloads

Download top of 1977 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149326480-149326630RP11-403I13.515.19
chr1: 151131620-151131770TNFAIP8L222.52
chr9: 116112600-116112750BSPRY35.07
chr9: 116112600-116112750HDHD335.07
chr9: 116112600-116112750POLE335.07
chr1: 150532840-150532990TARS235.16
chr1: 150532840-150532990ENSA35.16
chr10: 26727960-26728110APBB1IP36.34
chr10: 26727960-26728110RNA5SP30736.34
chr1: 203618920-203619070ATP2B436.57
View top connections.

Other

CodePlot