SOM cluster: 2064

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 371
Promoter: 1%
CpG-Island: 0%
Conserved: 46%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 3.4e-17
Factore-val(match)DB
RUNX10.00000048832JASPAR
RREB10.00088057JASPAR
ZNF354C0.0018689JASPAR
MYC::MAX0.013963JASPAR
Tcfcp2l10.014497JASPAR
Sites: 19/100 | e-val: 0.21
Factore-val(match)DB
Foxd30.0000000044061JASPAR
FOXI10.000000024677JASPAR
FOXA10.00000072824JASPAR
Foxq10.000029512JASPAR
Foxa20.00019803JASPAR

BED file downloads

Download top of 371 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 124007260-124007410DERL146.48
chr8: 124007260-124007410RP11-557C18.346.48
chr5: 79550600-79550750SERINC549.32
chr5: 79550600-79550750snoU1349.32
chrX: 54207660-54207810RPL7AP7152.27
chr21: 36264640-36264790RUNX158.16
chr13: 103465040-103465190BIVM58.18
chr13: 103465040-103465190ERCC558.18
chr2: 160146920-160147070WDSUB158.9
chr1: 53771940-53772090RP4-784A16.261.45
View top connections.

Other

CodePlot