SOM cluster: 2072

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 10488
Promoter: 2%
CpG-Island: 0%
Conserved: 16%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 35/100 | e-val: 0.0000000000000068
Factore-val(match)DB
Foxd30.00057882JASPAR
Foxq10.00075095JASPAR
Pax40.0022095JASPAR
MEF2A0.0041937JASPAR
HNF1B0.0047162JASPAR

BED file downloads

Download top of 10488 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 91988660-91988810RP11-47K11.211.4
chr1: 151131125-151131275TNFAIP8L213.49
chr1: 151131125-151131275SCNM113.49
chr1: 146518125-146518275NBPF13P17.93
chr9: 117130060-117130210DFNB3130.75
chr1: 92015040-92015190CDC730.77
chr1: 198978540-198978690RP11-16L9.331.74
chr2: 136694160-136694310AC093391.233.1
chr6: 15395460-15395610RNU6-645P34.47
chr1: 149206660-149206810RP11-403I13.835.17
View top connections.

Other

CodePlot