SOM cluster: 2077

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 338
Promoter: 4%
CpG-Island: 0%
Conserved: 38%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 8e-20
Factore-val(match)DB
Foxa20.0000000010166JASPAR
FOXA10.000000001597JASPAR
Foxd30.0000000038839JASPAR
Foxq10.00000042481JASPAR
HNF1B0.0000028553JASPAR
Sites: 11/100 | e-val: 0.00071
Factore-val(match)DB
RORA_10.00015243JASPAR
RXR::RAR_DR50.00043247JASPAR
NR4A20.00093192JASPAR
Esrrb0.00097504JASPAR
NR2F10.0091649JASPAR
Sites: 19/100 | e-val: 1.3
Factore-val(match)DB
FOXD10.000008104JASPAR
FOXA10.000012685JASPAR
FOXO30.000031824JASPAR
Foxd30.000081043JASPAR
Foxa20.000094229JASPAR

BED file downloads

Download top of 338 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr5: 116822900-116823050LINC0099256.06
chrX: 46427020-46427170ZNF674-AS158.13
chr2: 26287900-26288050RNU6-942P62.08
chr2: 26287900-26288050RAB1062.08
chr9: 123391040-123391190AHCYP267.97
chr5: 58336780-58336930RP11-266N13.268.91
chr5: 58336780-58336930PDE4D68.91
chr7: 89810120-89810270STEAP269.26
chr18: 7877740-7877890PTPRM78.76
chr16: 46910720-46910870GPT282.96
View top connections.

Other

CodePlot