SOM cluster: 2102

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 226
Promoter: 3%
CpG-Island: 0%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 31/100 | e-val: 0.0000033
Factore-val(match)DB
Foxd30.00017595JASPAR
Foxq10.00021JASPAR
Pou5f10.005334JASPAR
Pax40.0055771JASPAR
HNF1A0.0086068JASPAR

BED file downloads

Download top of 226 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr6: 1338200-1338350FOXF246.94
chr5: 143206600-143206750CTB-70D19.160.25
chr8: 12583820-12583970OR7E15P63.11
chr1: 56293860-56294010RP11-90C4.264.49
chr8: 82470220-82470370FTH1P1165.35
chr11: 65059165-65059315CDC42EP269.45
chr18: 21975140-21975290IMPACT69.57
chr18: 21975140-21975290OSBPL1A69.57
chr5: 93807380-93807530KIAA082571.03
chr5: 38465340-38465490LIFR-AS172.34
View top connections.

Other

CodePlot