SOM cluster: 2113

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 237
Promoter: 8%
CpG-Island: 0%
Conserved: 33%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 36/100 | e-val: 1.7e-20
Factore-val(match)DB
SPI10.0000000030673JASPAR
FEV0.0000026185JASPAR
ELF50.000011JASPAR
GABPA0.000032233JASPAR
ELK40.00049552JASPAR
Sites: 35/100 | e-val: 2.8
Factore-val(match)DB
RUNX10.0000000041947JASPAR
RREB10.0007818JASPAR
ZNF354C0.0050845JASPAR
Tcfcp2l10.0052427JASPAR
MYC::MAX0.01237JASPAR

BED file downloads

Download top of 237 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 126400480-126400630DENND1A40.46
chr3: 46995300-46995450NBEAL243.62
chr3: 46995300-46995450MYL343.62
chr1: 159770140-159770290DUSP2344.94
chr1: 159770140-159770290C1orf20444.94
chr1: 12211000-12211150TNFRSF850.67
chr1: 12211000-12211150TNFRSF1B50.67
chr4: 37782520-37782670PGM259.23
chr16: 75108965-75109115ZFP161.52
chr16: 75108965-75109115ZNRF161.52
View top connections.

Other

CodePlot