SOM cluster: 2122

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 3174
Promoter: 23%
CpG-Island: 71%
Conserved: 66%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 89/100 | e-val: 0
Factore-val(match)DB
SP10.000000021099JASPAR
Klf40.00026262JASPAR
PLAG10.00058134JASPAR
Egr10.0012219JASPAR
TFAP2A0.0020622JASPAR
Sites: 71/100 | e-val: 2.3e-28
Factore-val(match)DB
TFAP2A0.000083964JASPAR
RREB10.0037513JASPAR
Klf40.0044295JASPAR
Egr10.0053429JASPAR
SP10.010137JASPAR
Sites: 62/100 | e-val: 0.00000000000053
Factore-val(match)DB
PLAG10.0096939JASPAR
Myf0.010662JASPAR
E2F10.039222JASPAR
NHLH10.040464JASPAR
SP10.062692JASPAR

BED file downloads

Download top of 3174 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 150947825-150947975SETDB121.48
chr10: 26986985-26987135PDSS132.63
chr19: 30303245-30303395CCNE136.93
chr22: 37535940-37536090C1QTNF637.2
chr22: 37535940-37536090IL2RB37.2
chr12: 133485685-133485835CHFR37.53
chr1: 1080145-1080295TNFRSF1838.82
chr1: 1080145-1080295RP11-54O7.1438.82
chr1: 203275140-203275290FMOD41.01
chr17: 74073345-74073495TEN143.24
View top connections.

Other

CodePlot