SOM cluster: 2155

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 388
Promoter: 28%
CpG-Island: 5%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 46/100 | e-val: 1.9e-26
Factore-val(match)DB
SPI10.0000000024597JASPAR
SPIB0.000000068939JASPAR
FEV0.0000013123JASPAR
ELF50.0000096633JASPAR
ELK40.0001797JASPAR

BED file downloads

Download top of 388 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 26633540-26633690UBXN1135.98
chr13: 30423460-30423610LINC0057253.67
chr1: 226594100-226594250snoU1356.63
chr10: 27608805-27608955LRRC37A6P60.45
chr20: 47339285-47339435PREX160.49
chr2: 85805305-85805455VAMP860.56
chr11: 47428840-47428990MADD60.98
chr11: 47428840-47428990SLC39A1360.98
chr11: 47428840-47428990SPI160.98
chr10: 52177420-52177570SGMS161.48
View top connections.

Other

CodePlot