SOM cluster: 2156

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 270
Promoter: 1%
CpG-Island: 0%
Conserved: 62%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 2e-16
Factore-val(match)DB
Foxd30.00086038JASPAR
NKX3-10.0010638JASPAR
Foxq10.0016443JASPAR
MEF2A0.0055037JASPAR
Lhx30.01695JASPAR
Sites: 19/100 | e-val: 0.015
Factore-val(match)DB
NKX3-10.00047555JASPAR
Foxa20.0007027JASPAR
IRF20.0013402JASPAR
FOXA10.001787JASPAR
IRF10.0021762JASPAR
Sites: 25/100 | e-val: 1.7
Factore-val(match)DB
ARID3A0.0024387JASPAR
Stat30.037336JASPAR
FEV0.044432JASPAR
EWSR1-FLI10.051506JASPAR
Nkx2-50.061824JASPAR

BED file downloads

Download top of 270 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 53522940-53523090PODN39.28
chr1: 53522785-53522935SLC1A743.65
chr1: 53522785-53522935RP11-334A14.543.65
chr1: 53522785-53522935RP11-334A14.843.65
chr2: 135128760-135128910TMEM16359.42
chr18: 10374680-10374830APCDD160.51
chr15: 82372220-82372370EFTUD165.01
chr5: 149487865-149488015PDGFRB67.1
chr5: 149487865-149488015CDX167.1
chr4: 119684420-119684570METTL1468.03
View top connections.

Other

CodePlot