SOM cluster: 2165

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 428
Promoter: 4%
CpG-Island: 0%
Conserved: 29%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 23/100 | e-val: 0.000000054
Factore-val(match)DB
EWSR1-FLI10.00017715JASPAR
SPIB0.0021173JASPAR
IRF20.0026103JASPAR
IRF10.0026835JASPAR
FOXA10.0053217JASPAR

BED file downloads

Download top of 428 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 14613945-14614095FAM107B41.21
chr11: 73681160-73681310C2CD344.1
chr11: 73681160-73681310UCP244.1
chr5: 131558400-131558550SLC22A448.21
chr5: 131558400-131558550P4HA248.21
chr3: 33086300-33086450GLB150.83
chr7: 130526300-130526450AC016831.351.55
chr3: 30673180-30673330AC096921.252.07
chr9: 123668260-123668410PSMD5-AS155.19
chr16: 89031960-89032110CBFA2T355.51
View top connections.

Other

CodePlot