SOM cluster: 2166

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1217
Promoter: 1%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 1.1e-19
Factore-val(match)DB
RUNX10.00000040521JASPAR
RREB10.00064057JASPAR
ZNF354C0.0026171JASPAR
Tcfcp2l10.0083613JASPAR
MYC::MAX0.013176JASPAR
Sites: 14/100 | e-val: 0.0011
Factore-val(match)DB
NR1H2::RXRA0.000032531JASPAR
Prrx20.0033762JASPAR
Foxa20.003612JASPAR
FOXA10.0038307JASPAR
HNF1B0.0046456JASPAR

BED file downloads

Download top of 1217 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 92025720-92025870CDC725.44
chr1: 149851240-149851390BOLA130.33
chr1: 149851240-149851390HIST2H2AB30.33
chr1: 149851240-149851390SF3B430.33
chr1: 198928320-198928470RP11-16L9.333.75
chr7: 142013480-142013630TRBV6-137.35
chr1: 160537820-160537970CD8439.11
chr3: 13908220-13908370TPRXL40.24
chr6: 118978120-118978270CEP85L40.8
chr9: 132623260-132623410USP2042.22
View top connections.

Other

CodePlot