SOM cluster: 217

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 2032
Promoter: 1%
CpG-Island: 0%
Conserved: 17%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 0.000000000013
Factore-val(match)DB
Foxd30.000015286JASPAR
Lhx30.00010257JASPAR
Foxq10.00015875JASPAR
FOXI10.0047458JASPAR
HNF1A0.0054559JASPAR

BED file downloads

Download top of 2032 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr19: 38465900-38466050SIPA1L327.89
chr1: 183559360-183559510ARPC533.64
chr1: 183559360-183559510NCF233.64
chr7: 150105765-150105915RP4-584D14.535.12
chr7: 150105765-150105915LINC0099635.12
chr8: 37761205-37761355GPR12440.45
chr8: 37761205-37761355RAB11FIP140.45
chr22: 37318000-37318150NCF441.67
chr22: 37318000-37318150CSF2RB41.67
chr1: 160767340-160767490LY942.47
View top connections.

Other

CodePlot