SOM cluster: 2191

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 418
Promoter: 37%
CpG-Island: 66%
Conserved: 57%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 99/100 | e-val: 8.3e-25
Factore-val(match)DB
SP10.0000018966JASPAR
PLAG10.00018225JASPAR
TFAP2A0.00472JASPAR
RXR::RAR_DR50.0085489JASPAR
Pax50.009456JASPAR
Sites: 56/100 | e-val: 0.42
Factore-val(match)DB
SP10.00019645JASPAR
TFAP2A0.0045867JASPAR
PLAG10.0092473JASPAR
Zfx0.046045JASPAR
TEAD10.051677JASPAR
Sites: 54/100 | e-val: 0.000026
Factore-val(match)DB
ZNF354C0.039532JASPAR
NFIC0.046559JASPAR
BRCA10.073779JASPAR
NFATC20.095307JASPAR
Myb0.12366JASPAR

BED file downloads

Download top of 418 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 44240760-44240910AEBP136.89
chr1: 93545300-93545450MTF237.13
chr8: 102217165-102217315KB-1410C5.139.08
chr11: 72852180-72852330FCHSD240.88
chr8: 128806860-128807010PVT141.86
chr11: 118938625-118938775RPS2545.16
chr11: 118938625-118938775H2AFX45.16
chr11: 118938625-118938775RN7SL529P45.16
chr11: 118938625-118938775RP11-110I1.645.16
chr7: 108210700-108210850AC005487.247
View top connections.

Other

CodePlot