SOM cluster: 2219

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 273
Promoter: 12%
CpG-Island: 7%
Conserved: 45%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 1.3e-32
Factore-val(match)DB
IRF10.00000030719JASPAR
IRF20.0001095JASPAR
SPI10.0030063JASPAR
SPIB0.0061246JASPAR
FEV0.018881JASPAR

BED file downloads

Download top of 273 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 194210720-194210870LINC0088435.58
chr22: 37270120-37270270LL22NC01-81G9.341.75
chr22: 37270120-37270270PVALB41.75
chr22: 37270120-37270270NCF441.75
chr22: 37270120-37270270CSF2RB41.75
chr7: 45020400-45020550SNHG1549.14
chr7: 45020400-45020550NACAD49.14
chr1: 159891100-159891250IGSF954.97
chr1: 159891100-159891250LINC0113354.97
chr10: 26727160-26727310APBB1IP57.44
View top connections.

Other

CodePlot