SOM cluster: 224

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 277
Promoter: 7%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 56/100 | e-val: 0
Factore-val(match)DB
SPI10.000000090179JASPAR
SPIB0.00000074052JASPAR
IRF10.000018402JASPAR
FEV0.00019833JASPAR
ELF50.00093276JASPAR
Sites: 22/100 | e-val: 0.0000000033
Factore-val(match)DB
SPI10.00000055059JASPAR
SPIB0.000004518JASPAR
IRF10.0000087734JASPAR
IRF20.000068688JASPAR
FEV0.00064609JASPAR
Sites: 10/100 | e-val: 1.8
Factore-val(match)DB
IRF10.00000005652JASPAR
IRF20.00043695JASPAR
SPI10.00076579JASPAR
SOX90.00098864JASPAR
GABPA0.0065712JASPAR

BED file downloads

Download top of 277 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 161709740-161709890RPL31P1135.64
chr1: 161709740-161709890RP11-25K21.135.64
chr1: 161709740-161709890FCGR2B35.64
chr1: 161709740-161709890FCRLA35.64
chr5: 118677480-118677630TNFAIP850.04
chr3: 179066240-179066390MFN150.62
chr3: 179066240-179066390ZNF63950.62
chrX: 65266860-65267010RP6-159A1.253.02
chr6: 114126400-114126550RP1-249H1.453.93
chr11: 63399040-63399190HRASLS255.55
View top connections.

Other

CodePlot