SOM cluster: 225

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 182
Promoter: 7%
CpG-Island: 3%
Conserved: 36%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 73/100 | e-val: 0
Factore-val(match)DB
SPI10.000000011152JASPAR
SPIB0.00000077815JASPAR
FEV0.000039378JASPAR
ELF50.00016142JASPAR
ELK40.00052351JASPAR
Sites: 29/100 | e-val: 5.8e-19
Factore-val(match)DB
EWSR1-FLI10.0000000042511JASPAR
SP10.00000017855JASPAR
Pax40.000057936JASPAR
RREB10.00056939JASPAR
Tal1::Gata10.0010199JASPAR

BED file downloads

Download top of 182 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr7: 29995880-29996030WIPF348.01
chr7: 29995880-29996030SCRN148.01
chr7: 29995880-29996030FKBP1448.01
chr3: 126249160-126249310TXNRD349.09
chr1: 183549420-183549570NCF249.76
chr9: 139268060-139268210INPP5E51.69
chr9: 139268060-139268210SEC16A51.69
chr9: 139268060-139268210GPSM151.69
chr9: 139268060-139268210CARD951.69
chr16: 88770460-88770610CDT155.39
View top connections.

Other

CodePlot