SOM cluster: 2255

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 160
Promoter: 0%
CpG-Island: 0%
Conserved: 76%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 38/100 | e-val: 0.00071
Factore-val(match)DB
Foxd30.00012803JASPAR
HNF1A0.00015816JASPAR
FOXI10.00019041JASPAR
Foxq10.00024724JASPAR
MEF2A0.00040876JASPAR

BED file downloads

Download top of 160 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 202255820-202255970UBE2T46.79
chr8: 121255380-121255530COL14A147.82
chr3: 188693220-188693370TPRG149.89
chr3: 173340100-173340250NLGN154.4
chr8: 131554340-131554490ASAP158.35
chr1: 99135260-99135410SNX772.94
chr12: 2393720-2393870CACNA1C-AS477.17
chr12: 2393720-2393870CACNA1C77.17
chr12: 77882060-77882210RP1-34H18.179.25
chr6: 154518420-154518570RP11-317B3.281.4
View top connections.

Other

CodePlot