SOM cluster: 2267

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 190
Promoter: 8%
CpG-Island: 0%
Conserved: 37%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 0.000000000000001
Factore-val(match)DB
FEV0.0000000042539JASPAR
SPI10.000000012295JASPAR
ELK40.000000012446JASPAR
GABPA0.00000048121JASPAR
SPIB0.0000013765JASPAR
Sites: 19/100 | e-val: 0.0000038
Factore-val(match)DB
Foxd30.0011169JASPAR
SOX100.0025294JASPAR
IRF10.0074734JASPAR
EWSR1-FLI10.018297JASPAR
Pax40.019663JASPAR

BED file downloads

Download top of 190 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr8: 124168840-124168990FAM83A29.66
chr8: 124168840-124168990TBC1D3129.66
chr8: 124168840-124168990FAM83A-AS129.66
chr8: 42623800-42623950THAP134.75
chr8: 42623800-42623950CHRNA634.75
chr22: 36831840-36831990EIF3D46.41
chr22: 36831840-36831990RP5-1119A7.1446.41
chr19: 50004260-50004410FCGRT50.1
chr19: 50004260-50004410RPL13A50.1
chr19: 50004260-50004410PIH1D150.1
View top connections.

Other

CodePlot