SOM cluster: 2270

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 340
Promoter: 3%
CpG-Island: 0%
Conserved: 70%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 0.000000000000026
Factore-val(match)DB
MEF2A0.0031205JASPAR
ARID3A0.0033859JASPAR
HOXA50.022801JASPAR
HNF1A0.047362JASPAR
Foxq10.053883JASPAR
Sites: 29/100 | e-val: 0.41
Factore-val(match)DB
Pou5f10.00033154JASPAR
Sox20.0070148JASPAR
NFATC20.01065JASPAR
Stat30.015586JASPAR
Foxd30.028153JASPAR
Sites: 17/100 | e-val: 0.0041
Factore-val(match)DB
Foxd30.0016551JASPAR
EWSR1-FLI10.001734JASPAR
NFATC20.0022397JASPAR
SPI10.0077783JASPAR
IRF10.0082006JASPAR

BED file downloads

Download top of 340 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 124586560-124586710MSANTD236.56
chr11: 124586560-124586710NRGN36.56
chr11: 124586560-124586710RP11-677M14.536.56
chr1: 162602640-162602790DDR239.5
chr20: 50601925-50602075RNU6-347P41.61
chr20: 50601925-50602075ZFP6441.61
chr8: 131358640-131358790ASAP152.79
chr9: 13089260-13089410MPDZ64.14
chr10: 115469000-115469150RP11-211N11.567.1
chr11: 43382260-43382410TTC1767.5
View top connections.

Other

CodePlot