SOM cluster: 2277

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1990
Promoter: 2%
CpG-Island: 4%
Conserved: 27%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 49/100 | e-val: 0.000000000000017
Factore-val(match)DB
ZEB10.0023786JASPAR
TLX1::NFIC0.0073092JASPAR
EWSR1-FLI10.0089739JASPAR
INSM10.0094252JASPAR
Myf0.015138JASPAR
Sites: 27/100 | e-val: 0.000013
Factore-val(match)DB
PLAG10.00088969JASPAR
ZEB10.00094663JASPAR
PPARG::RXRA0.0013843JASPAR
REST0.0024338JASPAR
Arnt0.0049381JASPAR
Sites: 30/100 | e-val: 2.1
Factore-val(match)DB
REL0.0011039JASPAR
TP530.0028333JASPAR
TFAP2A0.0033817JASPAR
Klf40.0037819JASPAR
SP10.0044006JASPAR

BED file downloads

Download top of 1990 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr11: 17004085-17004235PLEKHA738.59
chr11: 17004085-17004235OR7E14P38.59
chr19: 35571880-35572030FXYD540.93
chr19: 35571880-35572030HPN40.93
chr16: 88818165-88818315APRT41.58
chr11: 825980-826130AP006621.143.97
chr11: 825980-826130EFCAB4A43.97
chr8: 120221280-120221430MAL244.91
chr3: 195364765-195364915LINC0096949.19
chr3: 195364765-195364915MUC2049.19
View top connections.

Other

CodePlot