SOM cluster: 2279

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 9540
Promoter: 4%
CpG-Island: 14%
Conserved: 43%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 95/100 | e-val: 0
Factore-val(match)DB
SP10.00000043426JASPAR
TFAP2A0.00015075JASPAR
PLAG10.00099891JASPAR
PPARG::RXRA0.0014156JASPAR
Pax40.0014608JASPAR
Sites: 95/100 | e-val: 5.4e-27
Factore-val(match)DB
PLAG10.0000000081382JASPAR
SP10.0028809JASPAR
Klf40.0030459JASPAR
EBF10.0039106JASPAR
TFAP2A0.0040616JASPAR
Sites: 32/100 | e-val: 0.012
Factore-val(match)DB
Myf0.00031356JASPAR
CTCF0.0014729JASPAR
NHLH10.0042809JASPAR
SPIB0.0051986JASPAR
ESR10.0055678JASPAR

BED file downloads

Download top of 9540 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr1: 149285780-149285930RP11-403I13.913.02
chr9: 139500405-139500555MIR12630.98
chr12: 49728625-49728775RP11-161H23.931.24
chr11: 65353360-65353510MALAT136.9
chr5: 1641505-1641655RP11-43F13.137.92
chr11: 64528125-64528275MAP4K239.46
chr11: 64528125-64528275SF139.46
chr19: 50361865-50362015SIGLEC1140.02
chr1: 1287885-1288035TAS1R341.01
chr1: 1287885-1288035RP4-758J18.241.01
View top connections.

Other

CodePlot