SOM cluster: 23

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 242
Promoter: 4%
CpG-Island: 0%
Conserved: 32%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 55/100 | e-val: 4.7e-18
Factore-val(match)DB
ZEB10.000037792JASPAR
NHLH10.000071797JASPAR
Myc0.00026634JASPAR
Arnt0.00037684JASPAR
Myf0.00051867JASPAR
Sites: 37/100 | e-val: 0.0000000034
Factore-val(match)DB
FEV0.000000010221JASPAR
SPI10.00000012884JASPAR
SPIB0.0000011619JASPAR
ELK40.0000058526JASPAR
ELF50.000031923JASPAR
Sites: 38/100 | e-val: 0.000000072
Factore-val(match)DB
RUNX10.00000070503JASPAR
RREB10.00002032JASPAR
ZNF354C0.0013498JASPAR
IRF20.0014096JASPAR
IRF10.00295JASPAR

BED file downloads

Download top of 242 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 45957105-45957255CCR938.69
chr21: 43881060-43881210AP001625.649.05
chr21: 43881060-43881210TMPRSS349.05
chr21: 43881060-43881210SLC37A149.05
chr17: 40285540-40285690RAB5C49.12
chr17: 40285540-40285690GHDC49.12
chr17: 40285540-40285690HSPB949.12
chr17: 40285540-40285690KCNH449.12
chr22: 40781540-40781690TNRC6B51.54
chr22: 40781540-40781690SGSM351.54
View top connections.

Other

CodePlot