SOM cluster: 2303

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 1230
Promoter: 17%
CpG-Island: 55%
Conserved: 64%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 70/100 | e-val: 0
Factore-val(match)DB
SP10.000000000083024JASPAR
RREB10.00018743JASPAR
Egr10.00053573JASPAR
Klf40.00077684JASPAR
TFAP2A0.00082147JASPAR
Sites: 47/100 | e-val: 0.00000053
Factore-val(match)DB
SP10.00000000011701JASPAR
Klf40.00001118JASPAR
Pax50.0035914JASPAR
TFAP2A0.0062511JASPAR
INSM10.018193JASPAR

BED file downloads

Download top of 1230 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr3: 48609485-48609635SLC26A634.6
chr1: 1168340-1168490RP11-465B22.540.2
chr1: 805425-805575LINC0011547.09
chrX: 48693705-48693855PCSK1N48.41
chr9: 132382880-132383030RP11-483H20.648.53
chr2: 177053685-177053835AC009336.2449.01
chr2: 177053685-177053835HOXD349.01
chr2: 177053685-177053835HOXD949.01
chr2: 177053685-177053835HOXD-AS149.01
chr2: 177053685-177053835HOXD149.01
View top connections.

Other

CodePlot