SOM cluster: 232

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 83
Promoter: 12%
CpG-Island: 8%
Conserved: 59%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 54/83 | e-val: 5.8e-40
Factore-val(match)DB
AP10.000000000043014JASPAR
NFE2L20.000000006115JASPAR
PPARG0.0031863JASPAR
NFE2L1::MafG0.0043944JASPAR
Pax60.015433JASPAR
Sites: 53/83 | e-val: 8e-25
Factore-val(match)DB
SPI10.00000010587JASPAR
FEV0.0000022283JASPAR
SPIB0.000063465JASPAR
GABPA0.0003419JASPAR
ELF50.0006194JASPAR
Sites: 37/83 | e-val: 0.0016
Factore-val(match)DB
Stat30.0000000053119JASPAR
FEV0.000000010582JASPAR
SPI10.00000010062JASPAR
ELK40.000014016JASPAR
GABPA0.000016817JASPAR
Sites: 29/83 | e-val: 0.0033
Factore-val(match)DB
Klf40.000038008JASPAR
SP10.0002686JASPAR
Pax40.0010138JASPAR
RUNX10.0019948JASPAR
RREB10.0065781JASPAR

BED file downloads

Download top of 83 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 75230140-75230290SEC14L157.29
chr17: 75230140-75230290RNU4-47P57.29
chr19: 42626020-42626170POU2F268.91
chr19: 42626020-42626170CTC-378H22.168.91
chr16: 134965-135115HBZ71.01
chr16: 134965-135115HBZP171.01
chr16: 134965-135115WASH4P71.01
chr19: 1214000-1214150RPS15P973.59
chr19: 1213845-1213995EFNA275.78
chr16: 57564020-57564170CCDC102A76.21
View top connections.

Other

CodePlot