SOM cluster: 2329

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 652
Promoter: 4%
CpG-Island: 0%
Conserved: 44%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 37/100 | e-val: 1.6e-16
Factore-val(match)DB
NFATC20.000080637JASPAR
Pou5f10.00053978JASPAR
Sox20.0035582JASPAR
Stat30.012133JASPAR
FOXO30.02824JASPAR
Sites: 11/100 | e-val: 2.3
Factore-val(match)DB
Lhx30.0000026199JASPAR
ARID3A0.00014847JASPAR
Foxa20.00016691JASPAR
MEF2A0.00061117JASPAR
Pdx10.00072409JASPAR

BED file downloads

Download top of 652 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr9: 110148780-110148930RP11-363D24.131.4
chr2: 124490240-124490390AC092646.148.26
chr9: 117551420-117551570TNFSF1553.95
chr3: 161113540-161113690PSMC1P757.3
chr8: 144137205-144137355C8orf3158.31
chr8: 37921605-37921755RP11-90P5.261.25
chr10: 98606280-98606430LCOR61.89
chr6: 138727680-138727830KIAA124466.89
chr6: 138727680-138727830HEBP266.89
chr11: 121228580-121228730SC5D67.66
View top connections.

Other

CodePlot