SOM cluster: 2336

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 311
Promoter: 6%
CpG-Island: 1%
Conserved: 32%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 47/100 | e-val: 5.6e-24
Factore-val(match)DB
Klf40.0000068081JASPAR
SP10.00016137JASPAR
Pax40.00017269JASPAR
RREB10.0005494JASPAR
ESR10.0043649JASPAR
Sites: 67/100 | e-val: 4.5e-18
Factore-val(match)DB
ESR10.0006077JASPAR
SP10.0020094JASPAR
TP530.0038472JASPAR
PPARG::RXRA0.0056639JASPAR
ESR20.026495JASPAR
Sites: 39/100 | e-val: 0.013
Factore-val(match)DB
Stat30.00027781JASPAR
Egr10.00057905JASPAR
SP10.00098863JASPAR
EBF10.0013781JASPAR
PLAG10.0018089JASPAR
Sites: 19/100 | e-val: 1.9
Factore-val(match)DB
INSM10.00016981JASPAR
PLAG10.0060876JASPAR
Klf40.0071058JASPAR
TFAP2A0.0081362JASPAR
SP10.0099875JASPAR

BED file downloads

Download top of 311 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 76222905-76223055SYNGR244.79
chr1: 161008045-161008195TSTD144.8
chr1: 161008045-161008195PVRL444.8
chr1: 161008045-161008195F11R44.8
chr1: 156123405-156123555RAB2546.51
chr8: 128878120-128878270PVT150.94
chr4: 3463045-3463275DOK752.87
chr11: 117799925-117800075TMPRSS1356.46
chr12: 48358085-48358235TMEM106C58.67
chr7: 134129000-134129150AKR1B158.84
View top connections.

Other

CodePlot