SOM cluster: 234

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 197
Promoter: 60%
CpG-Island: 86%
Conserved: 80%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 91/100 | e-val: 0
Factore-val(match)DB
SP10.00000025085JASPAR
TFAP2A0.00026767JASPAR
Egr10.0067963JASPAR
Klf40.012618JASPAR
NHLH10.021455JASPAR
Sites: 68/100 | e-val: 2.09999e-41
Factore-val(match)DB
SP10.0000063058JASPAR
TFAP2A0.000043212JASPAR
PLAG10.00019292JASPAR
Zfx0.022718JASPAR
Egr10.041715JASPAR
Sites: 55/100 | e-val: 0.5
Factore-val(match)DB
SP10.00002604JASPAR
TFAP2A0.0039694JASPAR
NHLH10.014813JASPAR
SPIB0.023741JASPAR
Myf0.02457JASPAR

BED file downloads

Download top of 197 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr10: 22609945-22610095RP11-573G6.232.09
chr10: 22609945-22610095BMI132.09
chr2: 8819300-8819450ID244.84
chr11: 67210925-67211075PITPNM146.73
chr11: 67210925-67211075POLD446.73
chrX: 2847340-2847490ARSD50.81
chr21: 47401620-47401770PCBP352.54
chr15: 96900480-96900630NR2F256.26
chr15: 96900480-96900630RP11-522B15.356.26
chr16: 447760-447910AXIN158.93
View top connections.

Other

CodePlot