SOM cluster: 2348

Cluster Hypersensitivity Profile


Genomic Location Trend

These plots show the distribution of the DHS sites surrounding the Transcript Start Site of the nearest gene.

Stats

Number of sites: 176
Promoter: 11%
CpG-Island: 2%
Conserved: 51%

Enriched Motifs & Matches

Match Detail: [Jaspar]
Sites: 44/100 | e-val: 1.4e-23
Factore-val(match)DB
TP530JASPAR
Tcfcp2l10.000063025JASPAR
NF-kappaB0.0022104JASPAR
REL0.002669JASPAR
Stat30.0047557JASPAR
Sites: 20/100 | e-val: 0.0000002
Factore-val(match)DB
Pax40.00000020188JASPAR
SP10.00000026885JASPAR
RREB10.000015157JASPAR
EWSR1-FLI10.0017614JASPAR
Klf40.0038805JASPAR
Sites: 19/100 | e-val: 2.8
Factore-val(match)DB
EWSR1-FLI10.000028232JASPAR
SP10.000056605JASPAR
SPIB0.00036117JASPAR
SPI10.0033639JASPAR
MZF1_1-40.01653JASPAR

BED file downloads

Download top of 176 regions.

Top 10 Example Regions

LocationGene LinkDist.
chr17: 73685585-73685735RECQL548.17
chr17: 73685585-73685735ITGB448.17
chr17: 73685585-73685735SAP30BP48.17
chr18: 21451440-21451590LAMA352.78
chr8: 134315325-134315475NDRG158.98
chr1: 204413100-204413250RP11-430C7.261.83
chr3: 47022105-47022255NBEAL262.61
chr2: 74649440-74649590WDR5462.73
chr2: 74649440-74649590RTKN62.73
chr2: 74649440-74649590INO80B62.73
View top connections.

Other

CodePlot